BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F12LP1|AL429940
(883 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1703 0.0
>3x_Contig1806
Length = 53694
Score = 1703 bits (859), Expect = 0.0
Identities = 859/859 (100%)
Strand = Plus / Plus
Query: 25 gatctttatttacgtcattcttatccgttccatacttggttacaacctggatctctggtt 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28712 gatctttatttacgtcattcttatccgttccatacttggttacaacctggatctctggtt 28771
Query: 85 acctaacccaacatttcattagtaccaactggagatggggttatggtatgttcgctattc 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28772 acctaacccaacatttcattagtaccaactggagatggggttatggtatgttcgctattc 28831
Query: 145 ttactcctgctgtgttgacacccgctataataatgatctcttggttagatcggaaggcca 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28832 ttactcctgctgtgttgacacccgctataataatgatctcttggttagatcggaaggcca 28891
Query: 205 ataagagtggagaaacaccaattggtgttgatccactagccgagaagaaaaggttgatca 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28892 ataagagtggagaaacaccaattggtgttgatccactagccgagaagaaaaggttgatca 28951
Query: 265 aacaatctgaaatcgatggtttaagagcttggttgattctgttaaagggtgctcttattg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28952 aacaatctgaaatcgatggtttaagagcttggttgattctgttaaagggtgctcttattg 29011
Query: 325 aaattgatgcctttggtttagtattgcttggtttcgccttttctttgatgttgattccat 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29012 aaattgatgcctttggtttagtattgcttggtttcgccttttctttgatgttgattccat 29071
Query: 385 gctctttatactcatatgctgttgggggttggaataacccaagtatgatagcaatggagg 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29072 gctctttatactcatatgctgttgggggttggaataacccaagtatgatagcaatggagg 29131
Query: 445 tagttggtggtattttgctgatttgttacgcggtttatgaaatctggtttgccccattcc 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29132 tagttggtggtattttgctgatttgttacgcggtttatgaaatctggtttgccccattcc 29191
Query: 505 cattgctaccaaagagagtcttaactaacagaacattcatttgctgtgtcataattgatt 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29192 cattgctaccaaagagagtcttaactaacagaacattcatttgctgtgtcataattgatt 29251
Query: 565 tcatctaccaaatgggtggttacttctctctattgtacttcacctcgtatactagtgttg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29252 tcatctaccaaatgggtggttacttctctctattgtacttcacctcgtatactagtgttg 29311
Query: 625 tattaaacttgtctatccaagactagacttatttgtccaacacgaccacgatgggtttgt 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29312 tattaaacttgtctatccaagactagacttatttgtccaacacgaccacgatgggtttgt 29371
Query: 685 gtttctttggtgttttctggggtgcgttgtttagagttttccgccgttacaaaatattcc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29372 gtttctttggtgttttctggggtgcgttgtttagagttttccgccgttacaaaatattcc 29431
Query: 745 aagttaccggtattgccattaaattgattggtatgggtctatatgtgttgtgttctacga 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29432 aagttaccggtattgccattaaattgattggtatgggtctatatgtgttgtgttctacga 29491
Query: 805 aggaagatggtccacatttaggtctcgtcgttgctgcacttattattacatgttttggtg 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29492 aggaagatggtccacatttaggtctcgtcgttgctgcacttattattacatgttttggtg 29551
Query: 865 atgccgctaatgttatggg 883
|||||||||||||||||||
Sbjct: 29552 atgccgctaatgttatggg 29570
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6393
Number of Sequences: 1807
Number of extensions: 6393
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 883
length of database: 10,358,551
effective HSP length: 16
effective length of query: 867
effective length of database: 10,329,639
effective search space: 8955797013
effective search space used: 8955797013
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)